GWAS-related eQTLs across different cancer types
We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).
|
Cancer type
|
eQTL type
|
tagSNP
|
Gene position (hg19)
|
p-value
|
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| THCA | cis | rs10043228 | 1 | rs62384231 | chr5:115530304 | COMMD10 | chr5:115420727-115628978:+ | 0.48 | 5.84 | 9.44E-9 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384233 | chr5:115533597 | COMMD10 | chr5:115420727-115628978:+ | 0.48 | 5.84 | 9.44E-9 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384235 | chr5:115534234 | COMMD10 | chr5:115420727-115628978:+ | 0.48 | 5.7 | 2.09E-8 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384236 | chr5:115534637 | COMMD10 | chr5:115420727-115628978:+ | 0.48 | 5.7 | 2.09E-8 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384237 | chr5:115540222 | COMMD10 | chr5:115420727-115628978:+ | 0.46 | 5.62 | 3.33E-8 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384238 | chr5:115542531 | COMMD10 | chr5:115420727-115628978:+ | 0.48 | 5.7 | 2.09E-8 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384253 | chr5:115563415 | COMMD10 | chr5:115420727-115628978:+ | 0.48 | 5.7 | 2.09E-8 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384468 | chr5:115623850 | COMMD10 | chr5:115420727-115628978:+ | 0.47 | 5.68 | 2.34E-8 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384469 | chr5:115624964 | COMMD10 | chr5:115420727-115628978:+ | 0.41 | 5.07 | 5.7E-7 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384471 | chr5:115631273 | COMMD10 | chr5:115420727-115628978:+ | 0.44 | 5.58 | 4.06E-8 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384476 | chr5:115649509 | COMMD10 | chr5:115420727-115628978:+ | 0.48 | 5.7 | 2.09E-8 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384493 | chr5:115673448 | COMMD10 | chr5:115420727-115628978:+ | 0.47 | 5.66 | 2.61E-8 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384678 | chr5:115422688 | COMMD10 | chr5:115420727-115628978:+ | 0.48 | 5.91 | 6.38E-9 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384697 | chr5:115438284 | COMMD10 | chr5:115420727-115628978:+ | 0.5 | 6.16 | 1.54E-9 | Asthma or chronic obstructive pulmonary disease |
| THCA | cis | rs10043228 | 1 | rs62384700 | chr5:115443805 | COMMD10 | chr5:115420727-115628978:+ | 0.5 | 6.16 | 1.54E-9 | Asthma or chronic obstructive pulmonary disease |